- Authors:
-
- Sato, Shusei ;
-
Andersen, Stig Uggerhøj
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0000-0002-1096-1468
Department of Molecular Biology and Genetics - Plant Molecular Biology, Department of Molecular Biology and Genetics, Science and Technology, Aarhus University
- Editor:
- Tabata, Satoshi, Stougaard, Jens
- DOI:
- 10.1007/978-3-662-44270-8_4
- Abstract:
- The current Lotus japonicus reference genome sequence is based on a hybrid assembly of Sanger TAC/BAC, Sanger shotgun and Illumina shotgun sequencing data generated from the Miyakojima-MG20 accession. It covers nearly all expressed L. japonicus genes and has been annotated mainly based on transcriptional evidence. Analysis of repetitive sequences suggests that they are underrepresented in the reference assembly, reflecting an enrichment of gene-rich regions in the current assembly. Characterization of Lotus natural variation by resequencing of L. japonicus accessions and diploid Lotus species is currently ongoing, facilitated by the MG20 reference sequence
- ISBN:
- 9783662442692
- Type:
- Book chapter
- Language:
- English
- Published in:
- Lotus Japonicus Genome, 2014, p. 35-40
- Main Research Area:
- Science/technology
- Publication Status:
- Published
- Series:
- Compendium of Plant Genomes
- Review type:
- Undetermined
- Publisher:
- Springer
- Submission year:
- 2014
- Scientific Level:
- Scientific
- ID:
- 274937555
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