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Sequence and comparative analysis of Leuconostoc dairy bacteriophages

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Authors:
  • Kot, Witold ;
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    University of Copenhagen
  • Hansen, Lars Henrik ;
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    University of Copenhagen
  • Neve, Horst ;
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    Max Rubner Institut
  • Hammer, Karin ;
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    Metabolic Signaling and Regulation, Department of Systems Biology, Technical University of Denmark
  • Jacobsen, Susanne ;
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    Department of Systems Biology, Technical University of Denmark
  • Pedersen, Per D. ;
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    Clerici-Sacco Group
  • Sørensen, Søren J. ;
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    University of Copenhagen
  • Heller, Knut J. ;
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    Max Rubner Institut
  • Vogensen, Finn K.
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    University of Copenhagen
DOI:
10.1016/j.ijfoodmicro.2014.01.019
Abstract:
Bacteriophages attacking Leuconostoc species may significantly influence the quality of the final product. There is however limited knowledge of this group of phages in the literature. We have determined the complete genome sequences of nine Leuconostoc bacteriophages virulent to either Leuconostoc mesenteroides or Leuconostoc pseudomesenteroides strains. The phages have dsDNA genomes with sizes ranging from 25.7 to 28.4kb. Comparative genomics analysis helped classify the 9 phages into two classes, which correlates with the host species. High percentage of similarity within the classes on both nucleotide and protein levels was observed. Genome comparison also revealed very high conservation of the overall genomic organization between the classes. The genes were organized in functional modules responsible for replication, packaging, head and tail morphogenesis, cell lysis and regulation and modification, respectively. No lysogeny modules were detected. To our knowledge this report provides the first comparative genomic work done on Leuconostoc dairy phages.
Type:
Journal article
Language:
English
Published in:
International Journal of Food Microbiology, 2014, Vol 176, Issue 4, p. 29-37
Keywords:
Bacteriophages; Lactic acid bacteria; Leuconostoc; Comparative genomics
Main Research Area:
Science/technology
Publication Status:
Published
Review type:
Peer Review
Submission year:
2014
Scientific Level:
Scientific
ID:
260424348

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