Hecker, Nikolai2; Wiegels, Tim3; Torda, Andrew E.5
1 Animal Genetics, Bioinformatics and Breeding, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, Københavns Universitet2 IKVH Animal Genetics, Bioinformatics, and breeding, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, Københavns Universitet3 European Molecular Biology Laboratory, Hamburg Outstation4 University of Hamburg5 University of Hamburg
There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 10 3 bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats.
Bioinformatics, 2013, Vol 29, Issue 22, p. 2941-2942