Krieger, Bärbel1; Schwermer, Carsten U.2; Rezakhani, Nastaran1; Horn, Marcus A.3; Gieseke, Armin2; Cytryn, Eddie4; Dror, Minz4; van Rijn, Jaap5; Drake, Harold L.3; Schramm, Andreas7
1 Department of Biological Sciences, Microbiology, Faculty of Science, Aarhus University, Aarhus University2 Max Planck Institute for Marine Microbiology, Bremen3 Dept. of Ecological Microbiology, University of Bayreuth4 Institute for Soil, Water and Environmental Sciences, ARO, The Volcani Center, Bet Dagan5 Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, Rehovot6 Department of Bioscience - Microbiology, Department of Bioscience, Science and Technology, Aarhus University7 Department of Bioscience - Microbiology, Department of Bioscience, Science and Technology, Aarhus University
DIVERSITY OF NITRATE-REDUCING AND DENITRIFYING BACTERIA IN A MARINE AQUACULTURE BIOFILTER AND THEIR RESPONSE TO SULFIDE B.U. Krieger 1,5, C. Schwermer 2, N. Rezakhani 5, M.A. Horn 1, A. Gieseke 2, E. Cytryn 3, D. Minz 3, J. van Rijn 4, H.L. Drake 1, A. Schramm 5 1 Dept. of Ecological Microbiology, University of Bayreuth, Bayreuth, Germany; 2 Max Planck Institute for Marine Microbiology, Bremen, Germany; 3 Institute for Soil, Water and Environmental Sciences, ARO, The Volcani Center, Bet Dagan, Israel; 4 Faculty of Agricultural, Food And Environmental Quality Sciences, The Hebrew University of Jerusalem, Rehovot, Israel; 5 Dept of Biological Sciences, Microbiology, University of Aarhus, Denmark Conventional aquaculture systems release nitrogen compounds and organic matter into marine environments. As an environmentally-friendly alternative, a zero-discharge mariculture system recently was developed containing a 3-stage biofilter for nitrification, denitrification/anaerobic sludge digestion, and sulfide oxidation. Sulfate reduction in the anaerobic part of the system leads to sulfide concentrations exceeding 5 mM, which may affect nitrate reduction and denitrification. Sulfide can inhibit nitrous oxide reductase, trigger a shift from denitrification to dissimilatory nitrate reduction to ammonium (DNRA), or be used as electron donor for nitrate reduction. The goal of this study was to identify and isolate nitrate-reducing and denitrifying bacteria from the biofilter and to investigate their response to sulfide concentrations relevant for the system. Almost 500 nitrate-consuming isolates were screened by 16S rRNA gene-RFLP; for each RFLP pattern representatives were sequenced. In total, 40 different strains were identified, some of them novel species, mostly affiliating with Alphaproteobacteria but also including Beta- and Gammaproteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. The diversity of the isolates was compared to the cultivation-independent diversity of nitrate-reducing and denitrifying bacteria based on narG and nosZ as functional marker genes. Growth experiments revealed great differences in sulfide-tolerance among isolates, ranging from < 50 µM to 5 mM; some strains were also able to oxidize sulfide. Increasing sulfide concentrations generally resulted in increased nitrous oxide production. Batch incubations of anaerobic sludge with 15N-nitrate confirmed the in situ relevance of these results and indicated a sulfide-induced shift from denitrification to DNRA.
Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (isme-11), 2006
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11th International Symposium on Microbial Ecology (ISME-11), 2006