Iglesias, J. E.3; Sabuncu, M. R.3; Van Leemput, Koen4
1 Department of Informatics and Mathematical Modeling, Technical University of Denmark2 Image Analysis and Computer Graphics, Department of Informatics and Mathematical Modeling, Technical University of Denmark3 Harvard Medical School4 Department of Applied Mathematics and Computer Science, Technical University of Denmark
Current label fusion methods enhance multi-atlas segmentation by locally weighting the contribution of the atlases according to their similarity to the target volume after registration. However, these methods cannot handle voxel intensity inconsistencies between the atlases and the target image, which limits their application across modalities or even across MRI datasets due to differences in image contrast. Here we present a generative model for multi-atlas image segmentation, which does not rely on the intensity of the training images. Instead, we exploit the consistency of voxel intensities within regions in the target volume and their relation to the propagated labels. This is formulated in a probabilistic framework, where the most likely segmentation is obtained with variational expectation maximization (EM). The approach is demonstrated in an experiment where T1-weighted MRI atlases are used to segment proton-density (PD) weighted brain MRI scans, a scenario in which traditional weighting schemes cannot be used. Our method significantly improves the results provided by majority voting and STAPLE.
Proceedings (international Symposium on Biomedical Imaging), 2012, p. 888-891
Label fusion; Multi-atlas segmentation
Main Research Area:
International Symposium on Biomedical Imaging. Proceedings
IEEE 9th International Symposium on Biomedical Imaging (ISBI 2012)IEEE International Symposium on Biomedical Imaging